Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl12P40224 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl12P40224 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.04□□□□□ -0.16
Cxcl12P40224 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.04□□□□□ -0.16
Cxcl12P40224 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.04□□□□□ -0.16
Cxcl12P40224 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cxcl12P40224 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.04□□□□□ -0.16
Cxcl12P40224 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl12P40224 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl12P40224 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl12P40224 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.04□□□□□ -0.16
Cxcl12P40224 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm4909-201ENSMUST00000118749 794 ntBASIC14.03□□□□□ -0.16
Cxcl12P40224 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm2260-201ENSMUST00000184965 657 ntBASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.03□□□□□ -0.16
Cxcl12P40224 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl12P40224 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl12P40224 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl12P40224 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl12P40224 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl12P40224 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl12P40224 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl12P40224 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.02□□□□□ -0.16
Cxcl12P40224 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.02□□□□□ -0.16
Cxcl12P40224 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm10434-201ENSMUST00000101158 471 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm14726-201ENSMUST00000120623 896 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm45186-201ENSMUST00000206874 478 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm5781-201ENSMUST00000219792 443 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 Gm19163-201ENSMUST00000223313 780 ntBASIC14.02□□□□□ -0.17
Cxcl12P40224 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms