Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Gm12490-201ENSMUST00000120255 560 ntBASIC11.28□□□□□ -0.6
Timp3P39876 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.28□□□□□ -0.6
Timp3P39876 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.28□□□□□ -0.6
Timp3P39876 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.28□□□□□ -0.6
Timp3P39876 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Timp3P39876 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Timp3P39876 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Timp3P39876 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.27□□□□□ -0.6
Timp3P39876 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Timp3P39876 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Timp3P39876 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Timp3P39876 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Timp3P39876 Gm14928-201ENSMUST00000120198 477 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.27□□□□□ -0.61
Timp3P39876 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Timp3P39876 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.27□□□□□ -0.61
Timp3P39876 Gm37917-201ENSMUST00000194711 392 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Gm45668-201ENSMUST00000211271 493 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Gm7653-201ENSMUST00000214567 508 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Timp3P39876 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.27□□□□□ -0.61
Timp3P39876 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Timp3P39876 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Timp3P39876 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Timp3P39876 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
Timp3P39876 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Timp3P39876 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Timp3P39876 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.26□□□□□ -0.61
Timp3P39876 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Timp3P39876 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.26□□□□□ -0.61
Timp3P39876 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.26□□□□□ -0.61
Timp3P39876 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Timp3P39876 Gm21470-201ENSMUST00000187680 696 ntBASIC11.26□□□□□ -0.61
Timp3P39876 Gm10766-202ENSMUST00000194123 606 ntBASIC11.26□□□□□ -0.61
Timp3P39876 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.26□□□□□ -0.61
Timp3P39876 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.26□□□□□ -0.61
Timp3P39876 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Timp3P39876 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Timp3P39876 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Timp3P39876 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Timp3P39876 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Timp3P39876 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms