Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cdh4P39038 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.15□□□□□ -0.3
Cdh4P39038 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh4P39038 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.15□□□□□ -0.3
Cdh4P39038 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Gm15240-201ENSMUST00000118156 720 ntBASIC13.15□□□□□ -0.3
Cdh4P39038 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh4P39038 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdh4P39038 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Cdh4P39038 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.15□□□□□ -0.3
Cdh4P39038 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdh4P39038 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh4P39038 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh4P39038 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cdh4P39038 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Cdh4P39038 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdh4P39038 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh4P39038 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh4P39038 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdh4P39038 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh4P39038 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdh4P39038 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh4P39038 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh4P39038 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh4P39038 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdh4P39038 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh4P39038 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh4P39038 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh4P39038 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cdh4P39038 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh4P39038 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms