Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Upk2P38575 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Upk2P38575 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Upk2P38575 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk2P38575 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.05□□□□□ -0.48
Upk2P38575 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.05□□□□□ -0.48
Upk2P38575 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk2P38575 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk2P38575 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk2P38575 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk2P38575 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Gm27989-201ENSMUST00000184721 107 ntBASIC12.04□□□□□ -0.48
Upk2P38575 Gm18905-201ENSMUST00000205454 928 ntBASIC12.04□□□□□ -0.48
Upk2P38575 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.04□□□□□ -0.48
Upk2P38575 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk2P38575 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Acot6-202ENSMUST00000222921 3622 ntBASIC12.04□□□□□ -0.48
Upk2P38575 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.04□□□□□ -0.48
Upk2P38575 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Upk2P38575 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Upk2P38575 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk2P38575 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Upk2P38575 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Upk2P38575 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Upk2P38575 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.03□□□□□ -0.48
Upk2P38575 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.03□□□□□ -0.48
Upk2P38575 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.03□□□□□ -0.48
Upk2P38575 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.03□□□□□ -0.48
Upk2P38575 Gm15920-201ENSMUST00000118998 402 ntBASIC12.03□□□□□ -0.48
Upk2P38575 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.03□□□□□ -0.48
Upk2P38575 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.03□□□□□ -0.48
Upk2P38575 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Upk2P38575 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk2P38575 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Upk2P38575 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Upk2P38575 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk2P38575 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Upk2P38575 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.02□□□□□ -0.49
Upk2P38575 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk2P38575 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk2P38575 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk2P38575 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk2P38575 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms