Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxa1P35582 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxa1P35582 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxa1P35582 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxa1P35582 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
Foxa1P35582 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxa1P35582 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Acot6-202ENSMUST00000222921 3622 ntBASIC12.69□□□□□ -0.38
Foxa1P35582 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.69□□□□□ -0.38
Foxa1P35582 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxa1P35582 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Foxa1P35582 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Foxa1P35582 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Foxa1P35582 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Foxa1P35582 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.69□□□□□ -0.38
Foxa1P35582 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.69□□□□□ -0.38
Foxa1P35582 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.69□□□□□ -0.38
Foxa1P35582 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.69□□□□□ -0.38
Foxa1P35582 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Foxa1P35582 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.69□□□□□ -0.38
Foxa1P35582 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Foxa1P35582 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.69□□□□□ -0.38
Foxa1P35582 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxa1P35582 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.68□□□□□ -0.38
Foxa1P35582 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.68□□□□□ -0.38
Foxa1P35582 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Foxa1P35582 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Foxa1P35582 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Foxa1P35582 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.68□□□□□ -0.38
Foxa1P35582 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.68□□□□□ -0.38
Foxa1P35582 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm44719-201ENSMUST00000206404 149 ntBASIC12.68□□□□□ -0.38
Foxa1P35582 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.68□□□□□ -0.38
Foxa1P35582 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.68□□□□□ -0.38
Foxa1P35582 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxa1P35582 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Foxa1P35582 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxa1P35582 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxa1P35582 Gm5279-201ENSMUST00000199575 745 ntBASIC12.67□□□□□ -0.38
Foxa1P35582 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.67□□□□□ -0.38
Foxa1P35582 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms