Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thbs1P35441 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Thbs1P35441 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Thbs1P35441 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.71□□□□□ -0.37
Thbs1P35441 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.71□□□□□ -0.37
Thbs1P35441 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.71□□□□□ -0.37
Thbs1P35441 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.71□□□□□ -0.37
Thbs1P35441 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.71□□□□□ -0.37
Thbs1P35441 Gm43703-201ENSMUST00000200523 763 ntBASIC12.71□□□□□ -0.37
Thbs1P35441 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Thbs1P35441 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Thbs1P35441 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Thbs1P35441 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.71□□□□□ -0.38
Thbs1P35441 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Thbs1P35441 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.7□□□□□ -0.38
Thbs1P35441 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs1P35441 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm6912-201ENSMUST00000117218 544 ntBASIC12.7□□□□□ -0.38
Thbs1P35441 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm24420-201ENSMUST00000176676 59 ntBASIC12.7□□□□□ -0.38
Thbs1P35441 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.7□□□□□ -0.38
Thbs1P35441 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Thbs1P35441 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.7□□□□□ -0.38
Thbs1P35441 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Thbs1P35441 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Thbs1P35441 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs1P35441 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.7□□□□□ -0.38
Thbs1P35441 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Thbs1P35441 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thbs1P35441 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Thbs1P35441 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Thbs1P35441 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.69□□□□□ -0.38
Thbs1P35441 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Gm13453-201ENSMUST00000118708 357 ntBASIC12.69□□□□□ -0.38
Thbs1P35441 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thbs1P35441 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms