Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Mmp13P33435 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Mmp13P33435 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Gm25144-201ENSMUST00000179561 110 ntBASIC14.06□□□□□ -0.16
Mmp13P33435 Gm25352-201ENSMUST00000179815 110 ntBASIC14.06□□□□□ -0.16
Mmp13P33435 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.06□□□□□ -0.16
Mmp13P33435 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 Gm6888-201ENSMUST00000221983 706 ntBASIC14.06□□□□□ -0.16
Mmp13P33435 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.06□□□□□ -0.16
Mmp13P33435 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Mmp13P33435 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Mmp13P33435 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.06□□□□□ -0.16
Mmp13P33435 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Mmp13P33435 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp13P33435 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.05□□□□□ -0.16
Mmp13P33435 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Gm5566-201ENSMUST00000116118 459 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Mmp13P33435 Mir7023-201ENSMUST00000185093 64 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Gm28630-201ENSMUST00000187806 498 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Gm38294-201ENSMUST00000192831 381 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.05□□□□□ -0.16
Mmp13P33435 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.05□□□□□ -0.16
Mmp13P33435 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Mmp13P33435 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Mmp13P33435 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp13P33435 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp13P33435 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Mmp13P33435 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp13P33435 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Mmp13P33435 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp13P33435 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms