Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.68■□□□□ 0.1
Vcam1P29533 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vcam1P29533 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vcam1P29533 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vcam1P29533 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.68■□□□□ 0.1
Vcam1P29533 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 Gm13123-201ENSMUST00000122173 492 ntBASIC15.68■□□□□ 0.1
Vcam1P29533 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.68■□□□□ 0.1
Vcam1P29533 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.68■□□□□ 0.1
Vcam1P29533 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Vcam1P29533 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcam1P29533 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vcam1P29533 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcam1P29533 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Vcam1P29533 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Vcam1P29533 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.67■□□□□ 0.1
Vcam1P29533 Gm6447-201ENSMUST00000118905 835 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcam1P29533 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Gm26927-201ENSMUST00000182385 965 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 Gm19184-201ENSMUST00000196798 928 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 Gm9823-201ENSMUST00000051212 327 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vcam1P29533 Gm10146-201ENSMUST00000072739 309 ntBASIC15.67■□□□□ 0.1
Vcam1P29533 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vcam1P29533 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcam1P29533 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vcam1P29533 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcam1P29533 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vcam1P29533 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Vcam1P29533 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vcam1P29533 Mir1247-201ENSMUST00000116706 82 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Vcam1P29533 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.66■□□□□ 0.1
Vcam1P29533 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcam1P29533 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.66■□□□□ 0.1
Vcam1P29533 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms