Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm8584-201ENSMUST00000171982 758 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.66□□□□□ -0.22
Nckap1P28660 Gm8463-201ENSMUST00000208573 613 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.66□□□□□ -0.22
Nckap1P28660 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.66□□□□□ -0.22
Nckap1P28660 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.65□□□□□ -0.22
Nckap1P28660 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Nckap1P28660 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.65□□□□□ -0.22
Nckap1P28660 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Nckap1P28660 Gm42550-201ENSMUST00000201553 960 ntBASIC13.65□□□□□ -0.22
Nckap1P28660 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nckap1P28660 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nckap1P28660 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.65□□□□□ -0.22
Nckap1P28660 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nckap1P28660 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm12390-201ENSMUST00000117897 397 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Gm13689-201ENSMUST00000119360 685 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Mir1982-201ENSMUST00000157368 74 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 AY702102-202ENSMUST00000194651 1173 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Gm44397-201ENSMUST00000195950 113 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 Gm38671-201ENSMUST00000200573 130 ntBASIC13.64□□□□□ -0.23
Nckap1P28660 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.64□□□□□ -0.23
Nckap1P28660 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nckap1P28660 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nckap1P28660 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nckap1P28660 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nckap1P28660 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.63□□□□□ -0.23
Nckap1P28660 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nckap1P28660 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms