Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cd40lgP27548 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.69□□□□□ -0.38
Cd40lgP27548 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm12585-201ENSMUST00000117307 290 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm15460-201ENSMUST00000118147 391 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm12428-201ENSMUST00000119844 727 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.68□□□□□ -0.38
Cd40lgP27548 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd40lgP27548 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd40lgP27548 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm7063-201ENSMUST00000186840 981 ntBASIC12.67□□□□□ -0.38
Cd40lgP27548 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.67□□□□□ -0.38
Cd40lgP27548 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.67□□□□□ -0.38
Cd40lgP27548 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.67□□□□□ -0.38
Cd40lgP27548 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.67□□□□□ -0.38
Cd40lgP27548 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd40lgP27548 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd40lgP27548 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms