Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
BdnfP21237 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BdnfP21237 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
BdnfP21237 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Gm13015-201ENSMUST00000118674 204 ntBASIC13.18□□□□□ -0.3
BdnfP21237 Mir1895-201ENSMUST00000122615 79 ntBASIC13.18□□□□□ -0.3
BdnfP21237 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.18□□□□□ -0.3
BdnfP21237 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.18□□□□□ -0.3
BdnfP21237 Gm44608-201ENSMUST00000206827 855 ntBASIC13.18□□□□□ -0.3
BdnfP21237 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.18□□□□□ -0.3
BdnfP21237 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.18□□□□□ -0.3
BdnfP21237 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BdnfP21237 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
BdnfP21237 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
BdnfP21237 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
BdnfP21237 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
BdnfP21237 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BdnfP21237 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BdnfP21237 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.17□□□□□ -0.3
BdnfP21237 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.17□□□□□ -0.3
BdnfP21237 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
BdnfP21237 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BdnfP21237 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BdnfP21237 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms