Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prim1P20664 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prim1P20664 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prim1P20664 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.46■□□□□ 0.39
Prim1P20664 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prim1P20664 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prim1P20664 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.46■□□□□ 0.39
Prim1P20664 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prim1P20664 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prim1P20664 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.46■□□□□ 0.38
Prim1P20664 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Prim1P20664 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prim1P20664 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prim1P20664 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.45■□□□□ 0.38
Prim1P20664 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Prim1P20664 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prim1P20664 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Prim1P20664 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Prim1P20664 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.45■□□□□ 0.38
Prim1P20664 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prim1P20664 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Prim1P20664 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prim1P20664 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.44■□□□□ 0.38
Prim1P20664 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.44■□□□□ 0.38
Prim1P20664 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Gm37965-201ENSMUST00000195304 1362 ntBASIC17.44■□□□□ 0.38
Prim1P20664 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Gm11803-201ENSMUST00000119966 444 ntBASIC17.44■□□□□ 0.38
Prim1P20664 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.44■□□□□ 0.38
Prim1P20664 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.44■□□□□ 0.38
Prim1P20664 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Prim1P20664 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.44■□□□□ 0.38
Prim1P20664 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC17.44■□□□□ 0.38
Prim1P20664 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Prim1P20664 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.44■□□□□ 0.38
Prim1P20664 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.44■□□□□ 0.38
Prim1P20664 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prim1P20664 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.43■□□□□ 0.38
Prim1P20664 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prim1P20664 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.43■□□□□ 0.38
Prim1P20664 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Prim1P20664 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.43■□□□□ 0.38
Prim1P20664 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prim1P20664 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prim1P20664 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Prim1P20664 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Gm24196-201ENSMUST00000179161 110 ntBASIC17.43■□□□□ 0.38
Prim1P20664 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Prim1P20664 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Gm27847-201ENSMUST00000183711 107 ntBASIC17.43■□□□□ 0.38
Prim1P20664 Gm27375-201ENSMUST00000183799 107 ntBASIC17.43■□□□□ 0.38
Prim1P20664 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.43■□□□□ 0.38
Prim1P20664 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.43■□□□□ 0.38
Prim1P20664 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prim1P20664 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms