Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Ccl1P10146 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.62□□□□□ -0.71
Ccl1P10146 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44357-201ENSMUST00000195897 142 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm19658-201ENSMUST00000196231 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44367-201ENSMUST00000196836 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44350-201ENSMUST00000197197 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44390-201ENSMUST00000197533 144 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44313-201ENSMUST00000198018 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44486-201ENSMUST00000198508 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44314-201ENSMUST00000199263 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44394-201ENSMUST00000199558 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44484-201ENSMUST00000199873 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44466-201ENSMUST00000200264 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44359-201ENSMUST00000200671 138 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccl1P10146 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.62□□□□□ -0.71
Ccl1P10146 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.62□□□□□ -0.71
Ccl1P10146 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ccl1P10146 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.61□□□□□ -0.71
Ccl1P10146 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ccl1P10146 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.61□□□□□ -0.71
Ccl1P10146 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Ccl1P10146 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.61□□□□□ -0.71
Ccl1P10146 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccl1P10146 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.61□□□□□ -0.71
Ccl1P10146 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Ccl1P10146 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ccl1P10146 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ccl1P10146 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms