Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Chmp6P0C0A3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp6P0C0A3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Chmp6P0C0A3 Acot6-202ENSMUST00000222921 3622 ntBASIC14.96□□□□□ -0.02
Chmp6P0C0A3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Chmp6P0C0A3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Gm9522-201ENSMUST00000182394 926 ntBASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp6P0C0A3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Syt7-204ENSMUST00000223586 1344 ntBASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms