Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxc9P09633 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Gm43758-201ENSMUST00000199500 367 ntBASIC17.66■□□□□ 0.42
Hoxc9P09633 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.66■□□□□ 0.42
Hoxc9P09633 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm13342-201ENSMUST00000121055 207 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm18935-201ENSMUST00000212692 664 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Cts7-204ENSMUST00000225321 1257 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.65■□□□□ 0.42
Hoxc9P09633 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxc9P09633 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc9P09633 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.64■□□□□ 0.42
Hoxc9P09633 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc9P09633 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc9P09633 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc9P09633 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc9P09633 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.64■□□□□ 0.42
Hoxc9P09633 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm8805-201ENSMUST00000117848 313 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm38158-201ENSMUST00000194617 339 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc9P09633 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.64■□□□□ 0.41
Hoxc9P09633 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc9P09633 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc9P09633 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms