Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LtaP09225 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LtaP09225 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.23□□□□□ -0.61
LtaP09225 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LtaP09225 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LtaP09225 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.22□□□□□ -0.61
LtaP09225 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LtaP09225 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.22□□□□□ -0.61
LtaP09225 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.22□□□□□ -0.61
LtaP09225 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.22□□□□□ -0.61
LtaP09225 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Gm5354-201ENSMUST00000182417 973 ntBASIC11.22□□□□□ -0.61
LtaP09225 Gm27772-201ENSMUST00000184900 187 ntBASIC11.22□□□□□ -0.61
LtaP09225 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.22□□□□□ -0.61
LtaP09225 Gm5279-201ENSMUST00000199575 745 ntBASIC11.22□□□□□ -0.61
LtaP09225 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.22□□□□□ -0.61
LtaP09225 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.22□□□□□ -0.61
LtaP09225 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LtaP09225 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LtaP09225 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LtaP09225 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LtaP09225 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
LtaP09225 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LtaP09225 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
LtaP09225 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.21□□□□□ -0.61
LtaP09225 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.21□□□□□ -0.61
LtaP09225 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LtaP09225 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LtaP09225 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.21□□□□□ -0.61
LtaP09225 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.21□□□□□ -0.61
LtaP09225 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Gm2445-201ENSMUST00000182798 989 ntBASIC11.21□□□□□ -0.61
LtaP09225 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.21□□□□□ -0.61
LtaP09225 Gm37917-201ENSMUST00000194711 392 ntBASIC11.21□□□□□ -0.61
LtaP09225 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.21□□□□□ -0.61
LtaP09225 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.21□□□□□ -0.61
LtaP09225 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.21□□□□□ -0.61
LtaP09225 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LtaP09225 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.21□□□□□ -0.61
LtaP09225 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LtaP09225 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LtaP09225 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
LtaP09225 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LtaP09225 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LtaP09225 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LtaP09225 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms