Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mir6392-201ENSMUST00000184924 108 ntBASIC12.23□□□□□ -0.45
P06344 Gm7653-201ENSMUST00000214567 508 ntBASIC12.23□□□□□ -0.45
P06344 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.23□□□□□ -0.45
P06344 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
P06344 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.23□□□□□ -0.45
P06344 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P06344 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
P06344 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.22□□□□□ -0.45
P06344 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
P06344 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.22□□□□□ -0.45
P06344 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P06344 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.22□□□□□ -0.45
P06344 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.22□□□□□ -0.45
P06344 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
P06344 Gm12341-201ENSMUST00000119724 503 ntBASIC12.22□□□□□ -0.45
P06344 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.22□□□□□ -0.45
P06344 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
P06344 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P06344 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P06344 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.22□□□□□ -0.45
P06344 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06344 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
P06344 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.21□□□□□ -0.45
P06344 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Mir698-201ENSMUST00000102164 109 ntBASIC12.21□□□□□ -0.45
P06344 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
P06344 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
P06344 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.21□□□□□ -0.45
P06344 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.21□□□□□ -0.45
P06344 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Gm9908-201ENSMUST00000211534 448 ntBASIC12.21□□□□□ -0.45
P06344 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.21□□□□□ -0.45
P06344 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.21□□□□□ -0.45
P06344 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06344 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
P06344 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.21□□□□□ -0.46
P06344 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.21□□□□□ -0.46
P06344 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.21□□□□□ -0.46
P06344 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.21□□□□□ -0.46
P06344 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.21□□□□□ -0.46
P06344 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06344 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
P06344 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms