Protein–RNA interactions for Protein: P01653

Ig kappa chain V-V region W3082, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01653 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.23□□□□□ -0.13
P01653 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.23□□□□□ -0.13
P01653 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
P01653 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.23□□□□□ -0.13
P01653 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.23□□□□□ -0.13
P01653 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.23□□□□□ -0.13
P01653 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.23□□□□□ -0.13
P01653 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01653 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01653 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.22□□□□□ -0.13
P01653 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Gm12928-201ENSMUST00000117115 573 ntBASIC14.22□□□□□ -0.13
P01653 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P01653 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
P01653 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01653 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P01653 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.21□□□□□ -0.13
P01653 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
P01653 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.21□□□□□ -0.13
P01653 Gm5687-201ENSMUST00000118252 640 ntBASIC14.21□□□□□ -0.13
P01653 Gm15806-201ENSMUST00000120696 955 ntBASIC14.21□□□□□ -0.13
P01653 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.21□□□□□ -0.13
P01653 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.21□□□□□ -0.13
P01653 Gm9002-201ENSMUST00000178437 499 ntBASIC14.21□□□□□ -0.13
P01653 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.21□□□□□ -0.13
P01653 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.21□□□□□ -0.13
P01653 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.21□□□□□ -0.13
P01653 Gm26315-201ENSMUST00000083890 321 ntBASIC14.21□□□□□ -0.13
P01653 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01653 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
P01653 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
P01653 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
P01653 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
P01653 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.21□□□□□ -0.14
P01653 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
P01653 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P01653 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms