Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col5a1O88207 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col5a1O88207 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Col5a1O88207 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.19□□□□□ -0.46
Col5a1O88207 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.19□□□□□ -0.46
Col5a1O88207 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.19□□□□□ -0.46
Col5a1O88207 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.19□□□□□ -0.46
Col5a1O88207 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col5a1O88207 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col5a1O88207 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.19□□□□□ -0.46
Col5a1O88207 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col5a1O88207 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col5a1O88207 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.19□□□□□ -0.46
Col5a1O88207 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.19□□□□□ -0.46
Col5a1O88207 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col5a1O88207 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.19□□□□□ -0.46
Col5a1O88207 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm5523-201ENSMUST00000180415 997 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col5a1O88207 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.18□□□□□ -0.46
Col5a1O88207 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm14028-201ENSMUST00000117434 479 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Mir6927-201ENSMUST00000184494 71 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.18□□□□□ -0.46
Col5a1O88207 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.18□□□□□ -0.46
Col5a1O88207 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col5a1O88207 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col5a1O88207 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms