Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm2272-201ENSMUST00000194903 582 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
Pfdn2O70591 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.48□□□□□ -0.57
Pfdn2O70591 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn2O70591 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.47□□□□□ -0.57
Pfdn2O70591 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.47□□□□□ -0.57
Pfdn2O70591 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.47□□□□□ -0.57
Pfdn2O70591 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn2O70591 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn2O70591 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.47□□□□□ -0.57
Pfdn2O70591 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms