Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm15770-201ENSMUST00000117498 584 ntBASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.56□□□□□ -0.24
Pdlim1O70400 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.56□□□□□ -0.24
Pdlim1O70400 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm24447-201ENSMUST00000083977 338 ntBASIC13.56□□□□□ -0.24
Pdlim1O70400 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.55□□□□□ -0.24
Pdlim1O70400 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.55□□□□□ -0.24
Pdlim1O70400 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim1O70400 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim1O70400 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm12485-201ENSMUST00000119641 291 ntBASIC13.54□□□□□ -0.24
Pdlim1O70400 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm26464-201ENSMUST00000157094 305 ntBASIC13.54□□□□□ -0.24
Pdlim1O70400 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim1O70400 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim1O70400 Gm5161-201ENSMUST00000075243 853 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms