Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trdmt1O55055 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Trdmt1O55055 Gm43822-201ENSMUST00000200285 476 ntBASIC15.04■□□□□ -0
Trdmt1O55055 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.04■□□□□ -0
Trdmt1O55055 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.04■□□□□ -0
Trdmt1O55055 Gm3961-201ENSMUST00000204425 994 ntBASIC15.04■□□□□ -0
Trdmt1O55055 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.04■□□□□ -0
Trdmt1O55055 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.04■□□□□ -0
Trdmt1O55055 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.04■□□□□ -0
Trdmt1O55055 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.04■□□□□ -0
Trdmt1O55055 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trdmt1O55055 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Trdmt1O55055 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.03■□□□□ -0
Trdmt1O55055 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trdmt1O55055 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.03■□□□□ -0
Trdmt1O55055 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.03■□□□□ -0
Trdmt1O55055 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Gm38266-201ENSMUST00000194931 421 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.03■□□□□ -0
Trdmt1O55055 Gm42627-201ENSMUST00000197347 224 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.03■□□□□ -0
Trdmt1O55055 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trdmt1O55055 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trdmt1O55055 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trdmt1O55055 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdmt1O55055 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.02■□□□□ -0
Trdmt1O55055 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.02■□□□□ -0
Trdmt1O55055 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trdmt1O55055 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.02■□□□□ -0
Trdmt1O55055 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.02■□□□□ -0
Trdmt1O55055 Gm25261-201ENSMUST00000157416 134 ntBASIC15.02■□□□□ -0
Trdmt1O55055 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.02■□□□□ -0
Trdmt1O55055 Gm25927-201ENSMUST00000175058 117 ntBASIC15.02■□□□□ -0
Trdmt1O55055 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.02■□□□□ -0
Trdmt1O55055 Gm43133-201ENSMUST00000197472 463 ntBASIC15.02■□□□□ -0
Trdmt1O55055 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.02■□□□□ -0
Trdmt1O55055 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdmt1O55055 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trdmt1O55055 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.02■□□□□ -0
Trdmt1O55055 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trdmt1O55055 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trdmt1O55055 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.02□□□□□ -0.01
Trdmt1O55055 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdmt1O55055 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdmt1O55055 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdmt1O55055 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdmt1O55055 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.01□□□□□ -0.01
Trdmt1O55055 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Trdmt1O55055 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.01□□□□□ -0.01
Trdmt1O55055 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trdmt1O55055 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms