Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Dkk1O54908 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 AV039307-201ENSMUST00000124795 1133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Mir6990-201ENSMUST00000183724 91 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Gm45098-201ENSMUST00000207179 657 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Dkk1O54908 Gm24035-201ENSMUST00000082867 107 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Dkk1O54908 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Dkk1O54908 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.56□□□□□ -0.4
Dkk1O54908 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dkk1O54908 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm25315-201ENSMUST00000116823 121 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm11245-201ENSMUST00000119419 1037 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm14212-201ENSMUST00000122023 826 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm8737-201ENSMUST00000122208 642 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm15077-201ENSMUST00000122344 362 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm25179-201ENSMUST00000122632 128 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm6736-201ENSMUST00000166583 948 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Dkk1O54908 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm28064-201ENSMUST00000185639 858 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm28466-201ENSMUST00000190678 659 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm38341-201ENSMUST00000195357 515 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm43575-201ENSMUST00000196420 516 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm18985-201ENSMUST00000196472 1079 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 AC158631.2-201ENSMUST00000219999 478 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 AC139294.1-201ENSMUST00000226708 571 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Dkk1O54908 mt-Td-201ENSMUST00000082404 70 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Dkk1O54908 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.55□□□□□ -0.4
Dkk1O54908 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Dkk1O54908 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms