Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
Limk2O54785 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limk2O54785 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Limk2O54785 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Limk2O54785 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limk2O54785 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limk2O54785 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.92□□□□□ -0.18
Limk2O54785 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.92□□□□□ -0.18
Limk2O54785 Gm9002-201ENSMUST00000178437 499 ntBASIC13.92□□□□□ -0.18
Limk2O54785 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limk2O54785 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.92□□□□□ -0.18
Limk2O54785 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.92□□□□□ -0.18
Limk2O54785 Gm17795-201ENSMUST00000214505 757 ntBASIC13.92□□□□□ -0.18
Limk2O54785 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.92□□□□□ -0.18
Limk2O54785 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.92□□□□□ -0.18
Limk2O54785 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Limk2O54785 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limk2O54785 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Limk2O54785 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Limk2O54785 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Limk2O54785 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Limk2O54785 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.91□□□□□ -0.18
Limk2O54785 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.91□□□□□ -0.18
Limk2O54785 Gm17150-201ENSMUST00000165577 381 ntBASIC13.91□□□□□ -0.18
Limk2O54785 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Limk2O54785 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Limk2O54785 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.91□□□□□ -0.18
Limk2O54785 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Limk2O54785 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.91□□□□□ -0.18
Limk2O54785 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limk2O54785 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.9□□□□□ -0.18
Limk2O54785 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Limk2O54785 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Limk2O54785 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.9□□□□□ -0.18
Limk2O54785 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Limk2O54785 Gm27772-201ENSMUST00000184900 187 ntBASIC13.9□□□□□ -0.18
Limk2O54785 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Limk2O54785 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.9□□□□□ -0.18
Limk2O54785 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.9□□□□□ -0.18
Limk2O54785 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.9□□□□□ -0.18
Limk2O54785 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.9□□□□□ -0.18
Limk2O54785 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limk2O54785 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms