Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.85□□□□□ -0.67
Efnb3O35393 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.85□□□□□ -0.67
Efnb3O35393 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.85□□□□□ -0.67
Efnb3O35393 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.85□□□□□ -0.67
Efnb3O35393 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.84□□□□□ -0.67
Efnb3O35393 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Efnb3O35393 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Efnb3O35393 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.84□□□□□ -0.67
Efnb3O35393 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.84□□□□□ -0.67
Efnb3O35393 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.84□□□□□ -0.67
Efnb3O35393 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.84□□□□□ -0.67
Efnb3O35393 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.84□□□□□ -0.67
Efnb3O35393 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Efnb3O35393 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Efnb3O35393 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Efnb3O35393 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Efnb3O35393 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Efnb3O35393 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Efnb3O35393 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Efnb3O35393 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Efnb3O35393 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.83□□□□□ -0.68
Efnb3O35393 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Efnb3O35393 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Gm2213-201ENSMUST00000197485 688 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Gm44719-201ENSMUST00000206404 149 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.83□□□□□ -0.68
Efnb3O35393 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Gm10175-201ENSMUST00000086013 645 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.83□□□□□ -0.68
Efnb3O35393 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.83□□□□□ -0.68
Efnb3O35393 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Efnb3O35393 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Efnb3O35393 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Efnb3O35393 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms