Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Gm1401-201ENSMUST00000122048 772 ntBASIC12.25□□□□□ -0.45
Alx4O35137 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.25□□□□□ -0.45
Alx4O35137 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.25□□□□□ -0.45
Alx4O35137 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.25□□□□□ -0.45
Alx4O35137 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.25□□□□□ -0.45
Alx4O35137 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Alx4O35137 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.25□□□□□ -0.45
Alx4O35137 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.25□□□□□ -0.45
Alx4O35137 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.24□□□□□ -0.45
Alx4O35137 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx4O35137 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Alx4O35137 Gm5566-201ENSMUST00000116118 459 ntBASIC12.24□□□□□ -0.45
Alx4O35137 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx4O35137 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.24□□□□□ -0.45
Alx4O35137 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.24□□□□□ -0.45
Alx4O35137 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.24□□□□□ -0.45
Alx4O35137 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx4O35137 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gm44771-201ENSMUST00000206975 626 ntBASIC12.24□□□□□ -0.45
Alx4O35137 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.24□□□□□ -0.45
Alx4O35137 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx4O35137 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Alx4O35137 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Alx4O35137 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx4O35137 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.24□□□□□ -0.45
Alx4O35137 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Alx4O35137 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.23□□□□□ -0.45
Alx4O35137 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.23□□□□□ -0.45
Alx4O35137 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Alx4O35137 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Alx4O35137 Rprl2-201ENSMUST00000157150 290 ntBASIC12.23□□□□□ -0.45
Alx4O35137 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Alx4O35137 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.23□□□□□ -0.45
Alx4O35137 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.23□□□□□ -0.45
Alx4O35137 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Mir497b-201ENSMUST00000093601 125 ntBASIC12.23□□□□□ -0.45
Alx4O35137 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Alx4O35137 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms