Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hps1O08983 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hps1O08983 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hps1O08983 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hps1O08983 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.78□□□□□ -0.36
Hps1O08983 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hps1O08983 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hps1O08983 Grk6-205ENSMUST00000224653 2976 ntBASIC12.78□□□□□ -0.36
Hps1O08983 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.77□□□□□ -0.36
Hps1O08983 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Hps1O08983 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Hps1O08983 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hps1O08983 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Hps1O08983 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.77□□□□□ -0.36
Hps1O08983 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Hps1O08983 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.77□□□□□ -0.37
Hps1O08983 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hps1O08983 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Hps1O08983 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.77□□□□□ -0.37
Hps1O08983 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hps1O08983 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.77□□□□□ -0.37
Hps1O08983 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.77□□□□□ -0.37
Hps1O08983 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hps1O08983 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hps1O08983 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms