Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebf3O08791 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.26□□□□□ -0.13
Ebf3O08791 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.25□□□□□ -0.13
Ebf3O08791 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.25□□□□□ -0.13
Ebf3O08791 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Ebf3O08791 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ebf3O08791 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf3O08791 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ebf3O08791 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Mir1894-201ENSMUST00000122802 81 ntBASIC14.25□□□□□ -0.13
Ebf3O08791 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.25□□□□□ -0.13
Ebf3O08791 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.25□□□□□ -0.13
Ebf3O08791 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ebf3O08791 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.25□□□□□ -0.13
Ebf3O08791 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ebf3O08791 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ebf3O08791 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.25□□□□□ -0.13
Ebf3O08791 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf3O08791 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.24□□□□□ -0.13
Ebf3O08791 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Gm12390-201ENSMUST00000117897 397 ntBASIC14.24□□□□□ -0.13
Ebf3O08791 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.24□□□□□ -0.13
Ebf3O08791 Gm43094-201ENSMUST00000196549 921 ntBASIC14.24□□□□□ -0.13
Ebf3O08791 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.24□□□□□ -0.13
Ebf3O08791 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ebf3O08791 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms