Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AlyrefO08583 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.91□□□□□ -0.18
AlyrefO08583 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.91□□□□□ -0.18
AlyrefO08583 Gm6621-201ENSMUST00000193251 772 ntBASIC13.91□□□□□ -0.18
AlyrefO08583 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.91□□□□□ -0.18
AlyrefO08583 Gm43378-201ENSMUST00000199336 582 ntBASIC13.91□□□□□ -0.18
AlyrefO08583 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.91□□□□□ -0.18
AlyrefO08583 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AlyrefO08583 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.9□□□□□ -0.18
AlyrefO08583 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AlyrefO08583 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.9□□□□□ -0.18
AlyrefO08583 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm15370-201ENSMUST00000117158 253 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm11331-201ENSMUST00000119764 288 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.9□□□□□ -0.18
AlyrefO08583 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AlyrefO08583 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.9□□□□□ -0.18
AlyrefO08583 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
AlyrefO08583 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
AlyrefO08583 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.89□□□□□ -0.19
AlyrefO08583 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AlyrefO08583 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.89□□□□□ -0.19
AlyrefO08583 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.89□□□□□ -0.19
AlyrefO08583 Gm11803-201ENSMUST00000119966 444 ntBASIC13.89□□□□□ -0.19
AlyrefO08583 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.89□□□□□ -0.19
AlyrefO08583 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.89□□□□□ -0.19
AlyrefO08583 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms