Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm14140-201ENSMUST00000119999 995 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm29310-201ENSMUST00000185468 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21825-201ENSMUST00000185728 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm29109-201ENSMUST00000185895 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21896-201ENSMUST00000186520 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21873-201ENSMUST00000186728 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21794-201ENSMUST00000187056 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21880-201ENSMUST00000187275 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21826-201ENSMUST00000187451 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21198-201ENSMUST00000188393 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21749-201ENSMUST00000189343 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21901-201ENSMUST00000189568 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm29424-201ENSMUST00000189716 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm28599-201ENSMUST00000189838 694 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21867-201ENSMUST00000189917 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm29269-201ENSMUST00000190087 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21722-201ENSMUST00000190153 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm28423-201ENSMUST00000190701 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21899-201ENSMUST00000190745 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21910-201ENSMUST00000191163 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21849-201ENSMUST00000191571 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm28678-201ENSMUST00000191593 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm20910-201ENSMUST00000193268 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm21871-201ENSMUST00000194621 696 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shisa8J3QNX5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Gm11543-201ENSMUST00000120758 370 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms