Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.45■□□□□ 0.22
NpcdF8VQB8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Gm6621-201ENSMUST00000193251 772 ntBASIC16.45■□□□□ 0.22
NpcdF8VQB8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Gm21769-201ENSMUST00000211922 111 ntBASIC16.45■□□□□ 0.22
NpcdF8VQB8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.45■□□□□ 0.22
NpcdF8VQB8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm13297-201ENSMUST00000120205 934 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm15782-201ENSMUST00000121073 445 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm10608-202ENSMUST00000213924 676 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NpcdF8VQB8 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.44■□□□□ 0.22
NpcdF8VQB8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gm38158-201ENSMUST00000194617 339 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gm37497-201ENSMUST00000195830 798 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.43■□□□□ 0.22
NpcdF8VQB8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.43■□□□□ 0.22
NpcdF8VQB8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms