Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Mir5120-201ENSMUST00000175020 78 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Mir6979-201ENSMUST00000183927 56 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Gm2260-201ENSMUST00000184965 657 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Gm37042-201ENSMUST00000193816 581 ntBASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Colca2F8VPY8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gm8738-201ENSMUST00000172606 329 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gm13097-201ENSMUST00000210722 397 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.86□□□□□ -0.35
Colca2F8VPY8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Colca2F8VPY8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Colca2F8VPY8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms