Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Gm38225-201ENSMUST00000194001 393 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Gm45612-201ENSMUST00000211320 160 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh1F7BJK1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdh1F7BJK1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh1F7BJK1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms