Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm15321-201ENSMUST00000121290 288 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gm18905-201ENSMUST00000205454 928 ntBASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh11xF6ZNL5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Gm44855-201ENSMUST00000205725 362 ntBASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh11xF6ZNL5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Syt7-205ENSMUST00000224135 1557 ntBASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh11xF6ZNL5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms