Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm12585-201ENSMUST00000117307 290 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm4875-201ENSMUST00000118257 786 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm4804-201ENSMUST00000182234 999 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm10766-202ENSMUST00000194123 606 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.11□□□□□ -0.15
Atf6F6VAN0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6F6VAN0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.1□□□□□ -0.15
Atf6F6VAN0 Gm13385-201ENSMUST00000121089 220 ntBASIC14.1□□□□□ -0.15
Atf6F6VAN0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf6F6VAN0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.09□□□□□ -0.15
Atf6F6VAN0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.09□□□□□ -0.15
Atf6F6VAN0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf6F6VAN0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms