Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm15198-201ENSMUST00000117283 177 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm11618-201ENSMUST00000117946 267 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm13369-201ENSMUST00000119442 987 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.4■□□□□ 0.22
Ube4aE9Q735 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube4aE9Q735 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.39■□□□□ 0.21
Ube4aE9Q735 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.39■□□□□ 0.21
Ube4aE9Q735 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm14350-201ENSMUST00000116642 640 ntBASIC16.39■□□□□ 0.21
Ube4aE9Q735 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.39■□□□□ 0.21
Ube4aE9Q735 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube4aE9Q735 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gm19184-201ENSMUST00000196798 928 ntBASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.38■□□□□ 0.21
Ube4aE9Q735 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Snora73a-201ENSMUST00000082453 205 ntBASIC16.38■□□□□ 0.21
Ube4aE9Q735 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms