Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd2E9PZM4 Gm12380-201ENSMUST00000119012 544 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gm27438-201ENSMUST00000183480 110 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd2E9PZM4 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 AC113031.8-201ENSMUST00000227856 631 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd2E9PZM4 Gm7789-202ENSMUST00000211273 1400 ntBASIC18.37■□□□□ 0.53
Chd2E9PZM4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gm11667-201ENSMUST00000119828 486 ntBASIC18.36■□□□□ 0.53
Chd2E9PZM4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.36■□□□□ 0.53
Chd2E9PZM4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chd2E9PZM4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd2E9PZM4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm13813-201ENSMUST00000120998 787 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm24845-201ENSMUST00000158034 109 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm9211-201ENSMUST00000182882 975 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm7207-201ENSMUST00000211575 1067 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm45219-201ENSMUST00000205602 465 ntBASIC18.35■□□□□ 0.53
Chd2E9PZM4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd2E9PZM4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Gm6963-201ENSMUST00000147879 379 ntBASIC18.34■□□□□ 0.53
Chd2E9PZM4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC18.34■□□□□ 0.53
Chd2E9PZM4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd2E9PZM4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC18.33■□□□□ 0.53
Chd2E9PZM4 Gm23363-201ENSMUST00000175024 79 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms