Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clca3bE9PUL3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.73□□□□□ -0.05
Clca3bE9PUL3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Clca3bE9PUL3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clca3bE9PUL3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm15806-201ENSMUST00000120696 955 ntBASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clca3bE9PUL3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clca3bE9PUL3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clca3bE9PUL3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clca3bE9PUL3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Clca3bE9PUL3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms