Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm9726-201ENSMUST00000180321 678 ntBASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx6-2D3Z4R4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Gm2451-201ENSMUST00000199447 999 ntBASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Gm10290-201ENSMUST00000200451 999 ntBASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-2D3Z4R4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nkx6-2D3Z4R4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nkx6-2D3Z4R4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-2D3Z4R4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms