Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm8810-201ENSMUST00000172895 754 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm13297-201ENSMUST00000120205 934 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm13385-201ENSMUST00000121089 220 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 Gm10156-201ENSMUST00000122364 462 ntBASIC11.57□□□□□ -0.56
Col6a4A2AX52 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.56□□□□□ -0.56
Col6a4A2AX52 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.56□□□□□ -0.56
Col6a4A2AX52 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.56□□□□□ -0.56
Col6a4A2AX52 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a4A2AX52 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.55□□□□□ -0.56
Col6a4A2AX52 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.55□□□□□ -0.56
Col6a4A2AX52 Mir686-201ENSMUST00000102174 109 ntBASIC11.55□□□□□ -0.56
Col6a4A2AX52 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gm13786-201ENSMUST00000122371 333 ntBASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms