Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gm29541-201ENSMUST00000191351 678 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gm6916-202ENSMUST00000205523 195 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Gm16476-201ENSMUST00000221544 139 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trav12-1A0N8R1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav12-1A0N8R1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav12-1A0N8R1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms