Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Gm12390-201ENSMUST00000117897 397 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcb1Q9Z0H3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcb1Q9Z0H3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcb1Q9Z0H3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcb1Q9Z0H3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms