Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ap4s1Q9WVL1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Gm13036-201ENSMUST00000117799 748 ntBASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Thap2-203ENSMUST00000218989 527 ntBASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ap4s1Q9WVL1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ap4s1Q9WVL1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ap4s1Q9WVL1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ap4s1Q9WVL1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ap4s1Q9WVL1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Gm27301-201ENSMUST00000184012 127 ntBASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Gm44719-201ENSMUST00000206404 149 ntBASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Birc2-201ENSMUST00000054878 378 ntBASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms