Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Gm3436-201ENSMUST00000179930 840 ntBASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Gm27321-201ENSMUST00000185021 205 ntBASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ClcnkaQ9WUB7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ClcnkaQ9WUB7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms