Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm8410-201ENSMUST00000117225 605 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm27622-201ENSMUST00000183779 60 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm9229-201ENSMUST00000222777 126 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.4□□□□□ -0.26
Cdh17Q9R100 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh17Q9R100 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh17Q9R100 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.39□□□□□ -0.27
Cdh17Q9R100 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.39□□□□□ -0.27
Cdh17Q9R100 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm8927-201ENSMUST00000181978 981 ntBASIC13.39□□□□□ -0.27
Cdh17Q9R100 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm3222-201ENSMUST00000071282 990 ntBASIC13.39□□□□□ -0.27
Cdh17Q9R100 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.39□□□□□ -0.27
Cdh17Q9R100 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdh17Q9R100 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms