Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm15653-201ENSMUST00000119247 907 ntBASIC12.24□□□□□ -0.45
Nubp2Q9R061 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm27631-201ENSMUST00000184163 466 ntBASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.24□□□□□ -0.45
Nubp2Q9R061 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Shd-206ENSMUST00000225145 998 ntBASIC12.24□□□□□ -0.45
Nubp2Q9R061 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nubp2Q9R061 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.23□□□□□ -0.45
Nubp2Q9R061 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gm12428-201ENSMUST00000119844 727 ntBASIC12.23□□□□□ -0.45
Nubp2Q9R061 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.23□□□□□ -0.45
Nubp2Q9R061 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.23□□□□□ -0.45
Nubp2Q9R061 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nubp2Q9R061 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Mir1897-201ENSMUST00000122581 272 ntBASIC12.22□□□□□ -0.45
Nubp2Q9R061 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.22□□□□□ -0.45
Nubp2Q9R061 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.22□□□□□ -0.45
Nubp2Q9R061 Gm16476-201ENSMUST00000221544 139 ntBASIC12.22□□□□□ -0.45
Nubp2Q9R061 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms