Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SrfQ9JM73 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.94□□□□□ -0.34
SrfQ9JM73 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm12241-201ENSMUST00000118330 726 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm7584-201ENSMUST00000175829 940 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm18377-201ENSMUST00000215141 607 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.93□□□□□ -0.34
SrfQ9JM73 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.93□□□□□ -0.34
SrfQ9JM73 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SrfQ9JM73 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm45657-201ENSMUST00000211318 1349 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Mir686-201ENSMUST00000102174 109 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm4857-201ENSMUST00000192718 785 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm35638-201ENSMUST00000220724 652 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SrfQ9JM73 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.92□□□□□ -0.34
SrfQ9JM73 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SrfQ9JM73 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SrfQ9JM73 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SrfQ9JM73 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.91□□□□□ -0.34
SrfQ9JM73 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SrfQ9JM73 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SrfQ9JM73 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.91□□□□□ -0.34
SrfQ9JM73 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.91□□□□□ -0.34
SrfQ9JM73 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SrfQ9JM73 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SrfQ9JM73 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms