Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gm6659-201ENSMUST00000174752 547 ntBASIC12.29□□□□□ -0.44
Trem1Q9JKE2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gm6296-201ENSMUST00000222599 943 ntBASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trem1Q9JKE2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.28□□□□□ -0.44
Trem1Q9JKE2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms