Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc17Q9ESX4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Gm27501-201ENSMUST00000183599 107 ntBASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Gm42627-201ENSMUST00000197347 224 ntBASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc17Q9ESX4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Gm13350-201ENSMUST00000120519 479 ntBASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Gm1335-201ENSMUST00000121653 386 ntBASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Gm27682-201ENSMUST00000183930 110 ntBASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Mir497b-201ENSMUST00000093601 125 ntBASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc17Q9ESX4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc17Q9ESX4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms