Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm13884-201ENSMUST00000118103 829 ntBASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm18195-201ENSMUST00000207604 706 ntBASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gm45167-201ENSMUST00000208007 322 ntBASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ube4bQ9ES00 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ube4bQ9ES00 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms